coronapp is a web application to annotate and monitor SARS-CoV-2 mutations, both worldwide and in user-selected countries. 4Institute for Pharmaceutical Technology and Biopharmacy, Friedrich Schiller University Jena, Lessingstrasse 8, 07743 Jena. International organizations take action in order to prevent a further spread of the virus—with the World Health Organization (WHO) leading the … [�{�I�)�$ ʚ3;tA!paTB�>XZL���z��P� ]� ��T�ˀ�Š{���� �6ׂcPYp�C �ǘ���Ys4*8��d�¦��B�֚S�1ơĴ��3`���TCDy�U^@�:�Y�x�ЁZ�����h�ᅌ0�yf���I��v�l���7��t�O��ȌJ�����W��q�i\� "�ʈ_'��DQ�@C�D��sbC���|��Sj�W`ƀC�Z*�E��w̚r�� "Bc‹�.��K��'�(hF�Eޔ���Fk��5����AGg�ӷ!Fiz��ʺ�Ԇ{�k���i�8 �oSS|\�@� �A�i�\�C�nh�D��Ê�\�I=���= 2m|��P������u�ɍ����mp+25�yR*�$?%T�gX�;ɲ>Snʖ&�k�V��o:yY�I�m��l��i+k wo�k���ך@M��5��Si� 0׬n���t��.u��xԥP�szi dr+���e��o2SV�$�&5b�0��b�[��*�^C�3~���h`R��/��� �;�D>��_���+��Y7�C=���;��� �u�mXr���ң�*��h�\�&�$�LݰҶf�c�˱k+譱l��|?�~�dS� This literature curation effort is now, Complete the online application form providing answers as directed Ensure you add relevant information to the “Application submission” section where you are asked to provide three 100-word paragraphs that cover your: scientific biography work history current research interests Upload a letter of support from your supervisor or a senior colleague, Complete the online application form Ensure you add relevant information to the “application submission” section where you are asked to provide three 100-word paragraphs that cover your: scientific biography work history current research interests Upload a letter of support from your supervisor or a senior colleague detailing reasons why you should be selected, International Virus Bioinformatics Meeting 2020, SARS-CoV-2 genome browser and related resources, Phylogeographic reconstruction using air transportation data. Increase of test capacities for suspected corona cases Researchers at the Friedrich Schiller University of Jena and the University Hospital Jena find an alternative to scarce buffer solutions when testing for the novel corona virus. When I called him to say thank you, he calmly said: “Ah, that’s the radiation. the Fundamentals of Modern Optics and the Structure of Matter courses. Through a review of the most relevant scientific literature, and considering different levels of experimental evidence, over 150 compounds have been identified that are potentially active against COVID-19. Its main focus is set on drug interactions either addressing viral proteins or human proteins that could be used to treat COVID. Further you can analyze the data online using sequence alignment, phylogenetic tree reconstruction, sequence variation (SNP), metadata-driven comparative analysis and BLAST. Designed using Hoot Business. Please note: Due to the Corona crisis DFN-web conferencing tools are currently frequently used. This is a fast-paced project with the COVID-19 Data Portal featuring relevant datasets from EMBL-EBI Data Resources including the European Nucleotide Archive (ENA), UniProt, Protein Data Bank in Europe (PDBe), the Electron Microscopy Data Bank (EMDB), Expression Atlas, ChEMBL, and Europe PMC. It estimates rooted, time-measured phylogenies using strict or relaxed molecular clock models. The LitCovid dataset contains a selection of papers referring to Coronavirus 19 disease. ��%����SIG�{ ��jx���A���l���-���8%�ES�kk`�,�-�$�B�Tm{����L̃��xS�SEV��*e�.�Jlۄ����ֶ�"R\��V�2����1�Z�L��V�I��d��Z�Lʲ]Ȕض�i�9����) r�F�32� 9W Essential information concerning this matter is … The ELM resource offers a collection of short linear motifs that mediate interactions crucial in both native cell regulation and pathogenic interference. DisGeNET COVID-19 data collection shows the results of applying text mining tools to the LitCovid dataset, to identify mentions of diseases, signs and symptoms. UniProt also hosted webinars to describe the portal and publication submission system. This heavy usage might lead to bottlenecks when it comes to setting up new meetings, or to disruptions when starting meetings. Er koordiniert die Einsätze dieser Freiwilligen mit medizinischer Ausbildung. COVID-19 UniProt portal provides early pre-release access to (i) SARS-CoV-2 annotated protein sequences, (ii) closest SARS proteins from SARS 2003, (iii) human proteins relevant to the biology of viral infection, like receptors and enzymes, (iv) ProtVista visualisation of sequence features for each protein, (v) links to sequence analysis tools, (vi) access to collated community-contributed publications relevant to COVID-19, as well as (vii) links to relevant resources. � �]{s�F��ۮ�w���Yr�|ʒE�ϖ��[��=)��Km��� ��3R��~���A"H�q��� ������|�7ή���̵�>q��;���j����3�w�k6�pay��9�˥J�;��^��bԆ��4�:貏!_�;��5�uW�T�ݸ�٭���5�R1=���m�E'��S$�LY���/�4eS*~�VK!m�IY)�BW���n�΄�eY!��� F���y�`H���ã�r �-!u�h�m0���b]s�p�kNݮ�����N�)�������|���xw>>��T�vɇ�/���vO��RL�ո#�cW���O�ݩ.��`e��*}�~�.� �sen��M�$W\���O���5�=΄��=[��(�8Z�)�wG�P���hKu��/��B���{�|ڳY�2���wKt�=�ܻ����T|�1��>��w\��]Z However, we are still available for you via email. V-Pipe has released a new version specifically adapted to analyze high-throughput sequencing data of SARS-CoV-2. It is capable of processing large libraries and is robust against mislabeled or low quality references. The latest 2020 release of ELM includes updated motif definitions and new instances covering nearly 300 motif classes based on over 3,400 publications. The GISAID Initiative promotes the rapid sharing of data from the coronavirus causing COVID-19. The European COVID-19 Data Portal was launched by EMBL-EBI in conjunction with the European Commission, the European Open Science Cloud and ELIXIR, as part of the wider European COVID-19 Data Platform. ELM and IUPred2A mutually include each other’s predictions, and both methods utilize the newest data from UniProt and Pfam. CORDITE (CORona Drug InTEractions database) collects and aggregates data from PubMed, MedRxiv, BioRxiv, and ChemRxiv for SARS-CoV-2. Find putative drug targets. In the autumn of 1986, I got a box of apples from my uncle. For the third year Bachelor Biology course “Vom Molekül zu komplexen Gemeinschaften (BB3.Ö13)“ at FSU Jena, PhD student Jennifer Gabriel and research group leader Nicole van Dam, Molecular Interaction Ecology designed a Corona proof “brown bag” practicum. The tool allows users to highlight and prioritize the most frequent mutations in specific protein regions, and to monitor their frequency in the population over time. The Lecture Hall Management section will support you in complying with the protection regulations. The Data Portal brings together and continuously updates the relevant COVID-19 datasets and tools. And our most important services will continue: We are processing all incoming applications including your mail. Corona macht erfinderisch! On average the observed changes would be expected to have no or minimal consequence on virus biology. The Master's programme starts in the winter semester 2020. Indeed, this tree has never borne so much fruit, and so superb. Mai, findet der Hochschulinformationstag (HIT) der Universität Jena erstmals digital statt. 14.3k Followers, 294 Following, 894 Posts - See Instagram photos and videos from Universität Jena (@unijena) CoVex is a unique online network and systems medicine platform for data analysis that integrates virus-human interactions for SARS-CoV-2 and SARS-CoV-1. /� ��lJ�4��s����2�����7���a)h��D�u��s�f�N?�}=��B��t2c}��'@ҟ�@Ճ_/�������h��d��ejΘ��+��!T��;�)a�������7S��̉*-����p��/!�`����к/�fȋ�����/` �+������0��4�.^Ã��`#�k��r4ܣ��ǐ�U/pC��={���� {C��hQ9OL�ˮx>�~�*�+���O!��Q}$��~�����1T)�5Q���/.�0��[���zi��\'��y ��X��C���]w�z.v�޻.x��4،�ӓ~Ķ���!a���A�7��{�I�V�4����7�|j-�j%>��_����9*{odj��ğ�r�Y�M�-�1(d���:���U/���a(���׈u��Үp���%f�w����GO��t�Tثd���àR{�L7�|Ap�j,�d)i ËtV��c2�q�I���q]��d�9�G$y%���Z��A�É�f�p�S�q�'�}��alה�1��C�=���@q/&c��T8�ɑ�G�M/�C�/ͩ��I&��՝������hb�E�R�ތ�!T@��D*�r��\�:��'&�E /�٧�o�K��$ƒ�G�ͣ�M�q�����KO'\3��_����5g�,�dT�[j��y����< �*�y+9�%���Қs�e���s0���0�&(��/����3�M��8�(��:U:OLp�u�lad�q���0g6�M}��˭�q�����v�=|� �/��77�$ This also applies if you are using rooms for the examination that are not centrally managed. For example, it is possible to search for a fragment of a SARS-CoV-2 genome, select similar sequences identified in COVID-19 patients, and browse sequence variants from different countries. If anything, the Corona crisis forces us to be creative about our teaching. CoV-GLUE is an online web application for the interpretation and analysis of SARS-CoV-2 virus genome sequences, with a focus on amino acid sequence variation. Please also use the e-mail address corona@jena.de. uni-assist has already taken comprehensive protective measures for the staff in its Berlin office. DisGeNET is a discovery platform containing one of the largest publicly available collections of genes and variants associated with human diseases. We are happy to answer your enquiries via our contact form. uni-assist has already taken comprehensive protective measures for the staff in its Berlin office. H���C�bTB���I1�\�Œ��g��v�H��[6v3y�-���� �2m�B��kħ��3�0ϸ��q�q�ʘ�n�Oڸ������-2ѸMΰ'Аr�|9�J���딶�k7��S���z�T�:ǔ���.e�B�+�j��9� ��]����׻�7UZBݮ�3�����X5����� ����,���ϻ��9uļ�����]o�؂�#>5)p��6�������y���r����l�C��n���������?�����l?t7t���]��$k�}W8x��sS���6Ѻߦ���m¡ߖX5n�>]l�@�)�˟6J��'". �:M�l��Μق��D�;];��#�%2�T�t��z$ ��M�l�H�h���F]��*Vwb�C�GܲCE�V�q���e�!����� SD}��ٌ[:/�*F�Л��q�֙Xp�;��p�l�2�����Q/>~j؃�ܒcGIDP�?��u���B.S In response to the SARS-CoV-2 outbreak, Rfam produced a special release 14.2 that includes 10 new and 4 revised families that can be used to annotate the SARS-CoV-2 and other Coronavirus genomes with RNA families. The opening page has been updated to give references to an overview of motif hijacking in viruses in general, and an application to detecting SARS-CoV-2 motif usage in host cell attachment and modulation. Please also have a look at our general list of virus bioinformatics tools. Volle Transparenz. Corona News. ViralZone project is handled by the virus program of SwissProt group. Pufferlösungen für PCR-Tests ���n1�P�G�,�t\5t����W Qe�.f�R��L�)��#��!sߐQbs�k�+�f���Hj�"z�c��?��NT���I�O ִ� If you wish to start a PhD at the University of Jena you have to register in the portal with your personal data. While the search uses the same sequences as NCBI BLAST, there are several important differences: The search is produced and maintained by the RNAcentral team, repurposing the infrastructure of the RNAcentral sequence similarity search to query betacoronavirus sequences instead of non-coding RNAs. Step-by-step guide. Our team is mostly working online. This tool is a work in progress and any suggestions would be greatly appreciated. Person working on a computer Image: Glenn Carstens-Peters Despite the official case numbers of Covid-19 in Jena and Thuringia being very low (as of 23.06.2020), the coming winter semester will nevertheless take place online.